| Issue |
ITM Web of Conferences
Volume 5, 2015
Workshop on Multiscale and Hybrid Modelling in Cell and Cell Population Biology
|
|
|---|---|---|
| Article Number | 00014 | |
| Number of page(s) | 5 | |
| DOI | https://doi.org/10.1051/itmconf/20150500014 | |
| Published online | 11 December 2015 | |
Enabling Large Scale Individual-Based Modelling through High Performance Computing
ICM, University of Warsaw, ul.Pawińskiego 5A, 02-106 Warszawa, Poland
a e-mail: z.szymanska@icm.edu.pl
We present a novel large scale parallel computational model allowing 3-D simulations of cell colonies growing and interacting with variable environment. The cells are modelled as individual objects located in the lattice-free 3-D space. The model incorporates cellular environment described in a continuous manner. Discrete and continuous formulations are eficiently coupled in one model allowing considerations of cell colonies composed of up to 109 individual cells. This large scale computational approach enables simulations to be carried out over realistic spatial scales up to 1cm3 in size i.e. the tissue scale.
© Owned by the authors, published by EDP Sciences, 2015
This is an Open Access article distributed under the terms of the Creative Commons Attribution License 4.0, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
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